Outliers and data cleaning

Review and remove outliers responsibly

Identify unusual observations relative to a stated baseline, inspect them individually, and preserve a defensible record of any exclusion.

Hands-on example

Try this in FigureCheck

Inspect the unusual point relative to a quadratic baseline, highlight it, and decide whether removal is defensible.

Opens a small synthetic dataset with a step-by-step guide in a new editable session.
Scatter plot showing an observation outside a 95 percent residual band relative to a fitted curved trend
Suggested outliers are relative to the chosen baseline. The highlighted observation is unusual for this fitted trend, not universally invalid.

An outlier is relative to a model

For X-Y data, an unusual point is often defined by its residual from a trend rather than by its Y value alone. A point can be extreme relative to a linear model and reasonable relative to a curved model.

Because the same observations are used to estimate the baseline, an extreme point can pull the fitted curve toward itself. Compare plausible baselines and inspect influential points rather than treating one automatic label as final.

Use FigureCheck's selection workflow

  1. Choose the series and baseline in Stats.
  2. Highlight suggested points and select a marker to inspect its row values.
  3. Check only the observations you intend to remove.
  4. Remove them from the working copy and compare the revised result with the original.

Reasons that can justify exclusion

Examples include a documented instrument failure, impossible transcription, failed quality-control criterion established before analysis, or a measurement outside the method's valid range. Disagreement with the hypothesis is not a sufficient reason.

Keep the original measurements. Report the rule, affected rows, and analysis with and without exclusions when the decision could change the conclusion.

FigureCheck Web v1.0.4 (20260805-002332) Next: Comparing two groups
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